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NIH PubChem APIs (Chem Data)
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NIH PubChem APIs (Chem Data)

API provider for NIH PubChem APIs

Developer PlatformsHealth Life ScienceScience Health PublicStructured DataKnowledge Base DataData Content
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1 credits
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Get NFPA Hazard Diamond Image

Generates an SVG image of the NFPA 704 hazard diamond based on hazard codes.

ImagingSafetySample: code
1 credit / call
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Get NFPA Hazard Image

Generates an SVG image of the NFPA 704 hazard diamond based on hazard codes.

ImagingHazardSample: code
1 credit / call
Unknown
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Get NMR Spectra Image

Generates an SVG image of NMR spectra from chemical shift: intensity pairs.

ImagingSpectroscopySample: peaks
1 credit / call
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Get NMR Spectra Image

Generates an SVG image of NMR spectra from shift: intensity pairs. Supports 1H, 13C, and 2D NMR types.

ImagingSpectrometrySample: peaks
1 credit / call
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Retrieve Pathway Data

Retrieves the data for a PubChem pathway record by Source: ExternalID.

DataRetrieveSample: format, source, external_id
1 credit / call
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Retrieve Pathway Data

Retrieves detailed pathway record data including identity, information, interactions, chemicals, proteins, genes, related pathways, and literature from PubChem PUG View service.

PathwayRetrieveSample: format, source, external_id
1 credit / call
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Retrieve Periodic Table Data

Returns a summary of data used to populate PubChem's periodic table page.

Sample: output_format
1 credit / call
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Retrieve protein summary by accession

Retrieve summary for proteins by NCBI Protein accessions (comma-separated list)

BioinformaticsProteinsSample: accession, output_format
1 credit / call
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Annotations by Heading

Retrieves annotations of a specific type (heading) across all PubChem primary databases, paged results with PubChem IDs and attribution.

PubchemAnnotationsSample: heading, output_format
1 credit / call
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Retrieve Pathway Data

Retrieves pathway data for a given pathway identifier using PubChem's PUG-View interface.

PathwayRetrieveSample: pathway_id
1 credit / call
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Retrieve Long QR Code for Compound

Generates a QR code linking to the LCSS page for a compound (long version).

DataRetrieveSample: cid, format
1 credit / call
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Retrieve Short QR Code for Compound

Generates a QR code linking to the LCSS page for a compound (short version).

DataRetrieveSample: cid, format
1 credit / call
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Retrieve Compound RDF

Retrieves RDF triples for a specific compound in various formats, supporting pagination with offset and limit parameters.

RdfRetrieveSample: id
1 credit / call
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Retrieve Assay Record

Returns full records for PubChem assays. Valid output formats are XML, JSON(P), ASNT/B, and CSV.

Sample: output, namespace, identifiers
1 credit / call
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Retrieve Compound Record

Returns full records for PubChem compounds. Valid output formats are XML, JSON(P), ASNT/B, SDF, and PNG.

Sample: output, namespace, identifiers
1 credit / call
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Retrieve Compound Record

Returns full records for PubChem compounds. Valid output formats are XML, JSON(P), ASNT/B, SDF, and PNG.

Sample: output, namespace, identifiers
1 credit / call
Unknown
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Get Periodic Table

Retrieves a summary of the data used to populate PubChem's periodic table page.

Sample: format
1 credit / call
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Get Sources

Retrieves source information for substances or assays in various formats.

Sample: type, format
1 credit / call
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Get Source Table

Retrieves a more complete table of source information, including organization names and record counts for substances or assays.

Sample: type, format
1 credit / call
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Standardize Input

Returns the standardized form of user input, such as SMILES, InChI, or SDF, with options for including components.

Sample: input, format, input_type
1 credit / call
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