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NCI Genomic Data Commons (GDC) API
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NCI Genomic Data Commons (GDC) API

The GDC Application Programming Interface (API) provides developers with a programmatic interface to query, analyze, and download GDC data and submit data to the GDC. The GDC API drives the GDC Data Portal, the GDC Submission Portal and is made accessible to external users for programmatic access to the same functionality found through GDC Portals

Data & AnalyticsHealth Life ScienceMedical RecordsScience Health PublicGenomic Variant DataGenomic Data SchemaGenomic Data Catalog
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Retrieve Submission Template

Retrieves a submission template for a specific entity type.

Sample: entity_type
1 credit / call
Unknown
Latency unavailable
Get Annotations

Search annotations added to data after curation.

SearchAnnotationsHealthcareSample: from, size, sort
1 credit / call
Unknown
Latency unavailable
Get Cases

Find all files related to a specific case, or sample donor.

SearchCasesSearch ApiSample: from, size, sort
1 credit / call
Unknown
Latency unavailable
Get Files

Find all files with specific characteristics such as file_name, md5sum, data_format and others.

SearchFilesSearch ApiSample: from, size, sort
1 credit / call
Unknown
Latency unavailable
List projects

Retrieve information about projects in the GDC.; Query and retrieve a list of projects in the GDC.

SearchProjectsHealthcareSample: from, size, sort
1 credit / call
Unknown
Latency unavailable
Retrieve project details

Retrieve detailed information for a specific project by project ID.; Retrieve metadata of a single project using its project_id.

SearchProjectsBioinformaticsSample: project_id
1 credit / call
Unknown
Latency unavailable
Get Entity Schema

Download GDC entity schemas from the dictionary endpoint.

SubmissionMetadataSample: entity_type
1 credit / call
Unknown
Latency unavailable
Get Submission Templates

Access submission templates for different entity types.

SubmissionMetadataSample: entity_type
1 credit / call
Unknown
Latency unavailable