The GDC Application Programming Interface (API) provides developers with a programmatic interface to query, analyze, and download GDC data and submit data to the GDC. The GDC API drives the GDC Data Portal, the GDC Submission Portal and is made accessible to external users for programmatic access to the same functionality found through GDC Portals
This provider-level handoff preserves only its public ID. No tool or business task is guessed; choose a current tool during rediscovery before setup can be treated as complete.
Search and retrieve information about files stored in the GDC using flexible query filters and response formatting options.; Retrieve metadata for files using POST request with filters, fields, format and size parameters.
Retrieve version information about one or more files using their UUIDs.
Search and retrieve version information about files using UUIDs or manifest.
Allows users to access summary information about genes using filters, such as chromosome.
Allows users to access summary information about a specific gene using its Ensembl ID.
Provides information about available fields for search and retrieval endpoints.
Retrieves occurrences of segment-level copy number variations (CNVs) in specific cases, filtered by project or other criteria.
Supports retrieval of occurrences of segment-level copy number variations (CNVs) in specific cases.
Retrieves segment-level copy number variations (CNVs) based on filters such as chromosome, position, and length.
Allows users to search and retrieve data for segment-level copy number variations (CNVs).
Get information about a specific SSM occurrence using its ID, often with expand option.
Allows users to access information about somatic mutations using filters, e.g., by COSMIC ID.
Get information about a specific SSM using its SSM ID, often with expand option.
Performs a quicksearch across projects, cases, files, genes, mutations, and annotations matching the query term.; Quickly retrieve information about files or other entities using a query parameter, such as searching by file name or submitter ID.
Search annotations added to data after curation
Retrieve cases using facets parameter to get available values for properties, such as demographic.gender.
Find all files with specific characteristics such as file_name, md5sum, data_format and others.
Search all data generated by a project
Retrieves the entire collection of GDC entity JSON schemas.
Retrieves the JSON schema for a specific entity type.
